Data Champions Search

I am a Research Associate in the Department of Biochemistry, where I specialise in electron cryo-microscopy (cryo-EM). I use cryo-EM data for the reconstruction and computational modelling of antibiotic transport by bacterial tripartite efflux pumps and related membrane proteins.

Additional areas of expertise:

Plant science, Quantitative genetics.

Qi received her PhD at the University of California, Los Angeles, where she developed computational methods to study alternative splicing and the evolution of HIV. Later she joined the UCLA Division of Dermatology to help identify the resistance mechanisms of targeted cancer therapies using computational tools. 
    
In 2011 she was awarded the Humboldt Research Fellowship to work in the Division of Theoretical Bioinformatics, and later the Division of Applied Bioinformatics, at the German Cancer Research Centre. There she worked on diverse bioinformatics projects with NGS data, such as studying genome-wide epigenetic regulation of cell differentiation, developing sequencing protocols and detecting somatic mutations from whole-genome sequencing data, as well as data integration and predictive modelling. 
    
Currently, she provides bioinformatics training and support to PhD students and postdoctoral researchers in the lab of Professor Beverley Glover.

Following a PhD and post-doctoral research in fruit fly (Drosophila) genetics, I joined the FlyBase group (https://www.pdn.cam.ac.uk/research/groups/flybase) at the University of Cambridge in 2006. FlyBase (https://flybase.org) is an online database of biological information about the model organism Drosophila melanogaster. Data are manually collated from the published literature by a team of curators and integrated with information from various external databases to produce our freely available website. In addition to managing the local FlyBase group, I am a PI on a project to develop a new metabolic pathway resource for Drosophila.