Data Champions Search

Alexia Cardona, PhD

Bioinformatics Training Developer

Department of Genetics

Areas Of Expertise:

R language, Git, Data visualisation, Big data, Data analysis, Bioinformatics, Workshop delivery, Social media and digital comms.

Contact Information

alexia.cardona@mrc-epid.cam.ac.uk

ORCiD:

0000-0002-7877-5565

Before joining the University of Cambridge I was a Software Engineer. Since then I have been working on different research projects across different Departments at the University investigating the epigenetics of obesity, diabetes and related metabolic disorders and human evolutionary genetics. I am currently the Bioinformatics Training Developer for the Bioinformatics Training Programme at the University.

Andrzej Harris, PhD

Research Associate

Department of Biochemistry

Areas Of Expertise:

Python, Matlab, Data visualisation, Data collection, Experimental design, Data sharing, Data archiving, Bioinformatics

Contact Information

ORCiD:

Biography

I am a Research Associate in the Department of Biochemistry, where I specialise in electron cryo-microscopy (cryo-EM). I use cryo-EM data for the reconstruction and computational modelling of antibiotic transport by bacterial tripartite efflux pumps and related membrane proteins.

Arian Jamasb

PhD student

Department of Biochemistry

Department of Computer Science and Technology

Areas Of Expertise:

Python, R language, Git, Data visualisation, Big data, Machine learning, Statistical analysis, Version control, Discipline-specific repositories, Data sharing, Code sharing, Open data, Cheminformatics, Bioinformatics

Contact Information

ORCiD:

Biography

My research focuses on the applications of machine learning to problems in structural biology and drug discovery.

Davide Chiarugi, PhD

Head of Bioinformatics

Institute of Metabolic Science

Areas Of Expertise:

Big data, Data analysis, Bioinformatics, Statistics, R language, Matlab, Coding, Data visualisation, Statistical analysis

Contact Information

dc702@medschl.cam.ac.uk

My LinkedIn Profile

ORCiD:

0000-0003-2752-3189

Florian Markowetz, PhD

Senior Group Leader

Cancer Research UK Cambridge Institute

Areas Of Expertise:

Big data, Discipline-specific repositories, Data analysis, Bioinformatics, Coding, R language, Git, Matlab, Data visualisation, Data mining, Machine learning, Statistical analysis, Experimental design, Imaging, Workshop delivery, Social media and digital communications

Contact Information

fm327@cam.ac.uk

@markowetzlab

ORCiD:

0000-0002-2784-5308

Biography

Florian Markowetz is a Senior Group Leader at the Cancer Research UK Cambridge Institute. He is a Royal Society Wolfson Research Merit Award holder and received a CRUK Future Leader in Cancer Research prize. He holds degrees in Mathematics (Dipl. math.) and Philosophy (M.A.) from the University of Heidelberg and a Dr. rer. nat. (PhD equivalent) in Computational Biology from Free University Berlin, for which he was awarded an Otto-Hahn Medal by the Max Planck Society. His group at the CRUK Cambridge Institute combines computational work on cancer evolution and image analysis of the tumour tissue with experimental work on understanding key cancer mechanisms like the estrogen receptor.

Hugo P. Bastos, PhD

Postdoctoral Research Associate, Haematology/Cambridge Stem Cell Institute

Areas Of Expertise:

Python, R language, SQL, Data visualisation, Machine learning, Statistical analysis, Database design, Data storage, Bioinformatics

Contact Information

hpb29@cam.ac.uk

ORCiD:

0000-0002-8072-4070

Biography

I provide Bioinformatic support for a few research groups in the Cambridge Stem Cell Institute. For the most part I deal with the analysis of single cell sequencing data, storage management of such data and the deployment of data processing pipelines into HPC environments.

Hugo Tavares, PhD

Postdoctoral Research Associate

Department of Genetics

Bioinformatics Training Facility

Areas Of Expertise:

Bioinformatics, Coding, Python, R language, Git, Data analysis, Data visualisation, Big data, Data mining, Machine learning, Statistical analysis, Data collection, Experimental design, Data storage, Institutional repositories, Discipline-specific repositories, Data sharing, Code sharing, Open data, Workshop delivery

Contact Information

hm533@cam.ac.uk

Biography

Additional areas of expertise:

Plant science, Quantitative genetics.

Jan Jezek, PhD

Postdoctoral Fellow, The Gurdon Institute

Areas Of Expertise:

C/C++/C# language, Java, Visual Basic, Data visualisation, Statistical analysis, Data collection, Imaging, Bioinformatics, Website development

Contact Information

jj508@cam.ac.uk

Biography

I am a postdoctoral fellow at The Gurdon Institute, University of Cambridge, UK. My research interests are mitochondrial and redox biology, cancer research, tumor suppressors, mitochondrial stress signaling, mitochondrial dynamics, reactive oxygen species, apoptosis, hypoxia, transcriptional cyclins, mitochondrial DNA inheritance, mitochondrial recombination, mitochondrial DNA polymerase gamma, cytochrome c oxidase, germline development, and Drosophila genetics.

Lyuba Bozhilova, PhD

Bioinformatician

Areas Of Expertise:

R language, Git, SQL, Data visualisation, Machine learning, Statistical analysis, Version control, Licensing, Copyright, Discipline-specific repositories, Code sharing, Bioinformatics, Relational data, Neo4j

Contact Information

ORCiD:

Biography

Lyuba is a bioinformatics postdoc based at the MRC Mitochondrial Biology Unit. She is interested in better understanding the uncertainties and biases associated with data collection, and how they affect downstream bioinformatics analysis.

Malwina Prater, PhD

Bioinformatician

Centre for Trophoblast Research

Areas Of Expertise:

Code sharing, Data analysis, Bioinformatics

Contact Information

mn367@cam.ac.uk

Biography

Providing bioinformatics support to ~30 research groups in the Centre for Trophoblast Research (CTR).

Alexia Cardona, PhD

Contact Information

Biography

Andrzej Harris, PhD

Contact Information

Biography

Arian Jamasb

Contact Information

Biography

Davide Chiarugi, PhD

Contact Information

Florian Markowetz, PhD

Contact Information

Biography

Hugo P. Bastos, PhD

Contact Information

Biography

Hugo Tavares, PhD

Contact Information

Biography

Jan Jezek, PhD

Contact Information

Biography

Lyuba Bozhilova, PhD

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Biography

Malwina Prater, PhD

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