Data Champions Search

Hugo P. Bastos, PhD

Postdoctoral Research Associate, Haematology/Cambridge Stem Cell Institute

Areas Of Expertise:

Python, R language, SQL, Data visualisation, Machine learning, Statistical analysis, Database design, Data storage, Bioinformatics

Contact Information

hpb29@cam.ac.uk

ORCiD:

0000-0002-8072-4070

I provide Bioinformatic support for a few research groups in the Cambridge Stem Cell Institute. For the most part I deal with the analysis of single cell sequencing data, storage management of such data and the deployment of data processing pipelines into HPC environments.

Hugo Tavares, PhD

Postdoctoral Research Associate

Department of Genetics

Bioinformatics Training Facility

Areas Of Expertise:

Bioinformatics, Coding, Python, R language, Git, Data analysis, Data visualisation, Big data, Data mining, Machine learning, Statistical analysis, Data collection, Experimental design, Data storage, Institutional repositories, Discipline-specific repositories, Data sharing, Code sharing, Open data, Workshop delivery

Contact Information

hm533@cam.ac.uk

Biography

Additional areas of expertise:

Plant science, Quantitative genetics.

Nicola Moloney, PhD

Postdoctoral Research Associate

Department of Biochemistry

Areas Of Expertise:

R language, Data analysis, Data visualisation, Data collection, Database design, Experimental design, Data storage

Contact Information

nm657@cam.ac.uk

My LinkedIn Profile

ORCiD:

0000-0003-4967-3284

Biography

I am a postdoctoral research associate in the Department of Biochemistry, University of Cambridge in Dr Paula MacGregor’s group. My research focuses on the parasites that cause African trypanosomiasis, a disease with significant burden in sub-Saharan Africa. Specifically, I use proteomics to spatially map the proteomes of African trypanosome species. This work will provide much needed functional insight into the cell biology of these parasites as well as their evolutionary diversification.

Additional areas of expertise:

Proteomics, Microbiology.

Qi Wang, PhD

Bioinformatician

Department of Plant Sciences

Areas Of Expertise:

Big data, Data analysis, Bioinformatics, Coding, Python, R language, SQL, Git, Data visualisation, Data mining, Machine learning, Statistical analysis, Experimental design, Data storage, Discipline-specific repositories, Data sharing, Code sharing, Writing/publishing data papers, Workshop delivery

Contact Information

qw254@cam.ac.uk

ORCiD:

0000-0002-6420-1720

Biography

Qi received her PhD at the University of California, Los Angeles, where she developed computational methods to study alternative splicing and the evolution of HIV. Later she joined the UCLA Division of Dermatology to help identify the resistance mechanisms of targeted cancer therapies using computational tools.

In 2011 she was awarded the Humboldt Research Fellowship to work in the Division of Theoretical Bioinformatics, and later the Division of Applied Bioinformatics, at the German Cancer Research Centre. There she worked on diverse bioinformatics projects with NGS data, such as studying genome-wide epigenetic regulation of cell differentiation, developing sequencing protocols and detecting somatic mutations from whole-genome sequencing data, as well as data integration and predictive modelling.

Currently, she provides bioinformatics training and support to PhD students and postdoctoral researchers in the lab of Professor Beverley Glover.

Russell Hamilton, PhD

Bioinformatics Facility Manager

Centre for Trophoblast Research (PDN)

Senior Research Associate

Department of Genetics

Areas Of Expertise:

Bioinformatics, Coding, Python, R language, Git, SQL, Data visualisation, Data storage, Institutional repositories, Discipline-specific repositories, Data sharing, Data archiving, Code sharing, Open data, Imaging, Website development

Contact Information

ORCiD:

Biography

Providing bioinformatics support to ~30 research groups in the Centre for Trophoblast Research (CTR).

Additional areas of expertise:

Systems admin.

Susana Sauret-Gueto

Research Manager / Research Associate

Department of Plant Sciences

Areas Of Expertise:

Electronic Laboratory Notebooks, Discipline-specific repositories, Repositories (general), FAIR Data, Data analysis, Bioinformatics, Laboratory Information Management Systems (LIMS), R language, Data visualisation, Data collection, Database design, Experimental design, Open data, Imaging

Contact Information

ss2359@cam.ac.uk

@susanasagu

Biography

Biocuration of lab type IIS standardised DNA registries through LIMS-Benchling and R. Assist in the overall management of OpenPlant lab, including Microscopy Hub. Conduct research in Synthetic Biology and Plant Development.

Additional areas of expertise:

Laboratory Information Management Systems (LIMS) – Benchling.

Tania L. Maxwell, PhD

Research Associate

Areas Of Expertise:

R language, Git, Data visualisation, Statistical analysis, Data collection, Data architecture, Version control, General repositories, Data sharing, Code sharing, Open data, FAIR Data, Data archiving, Workshop delivery, Website development

Contact Information

ORCiD:

Biography

I am a Postdoctoral Research Associate in the Conservation Science Group at the University of Cambridge, working on a global and updateable model and map of soil carbon in tidal marshes. To do so, I am compiling a global training dataset and will develop the model using R and Google Earth Engine. Previously, I worked on nutrient cycling in forests during my PhD at the French National Research Institute for Agriculture, Food and Environment (INRAE) in Bordeaux, and at Laval University in Quebec, Canada. My professional interests include ecology [forest, soil, coastal], biogeochemistry, global changes, R, data analysis and reproducible coding.

Xiaohui Zhao

Bioinformatician

Department of Physiology, Development and Neuroscience

Centre for Trophoblast Research

Areas Of Expertise:

Big data, Code sharing, Data analysis, Bioinformatics

Contact Information

xz289@cam.ac.uk

My LinkedIn Profile

ORCiD:

0000-0001-9922-2815

Biography

I provide statistics and bioinformatics support for CTR research groups. I also collaborate with Plant Science Department and XIamen University of China.

Hugo P. Bastos, PhD

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Hugo Tavares, PhD

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Biography

Nicola Moloney, PhD

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Biography

Qi Wang, PhD

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Biography

Russell Hamilton, PhD

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Biography

Susana Sauret-Gueto

Contact Information

Biography

Tania L. Maxwell, PhD

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Biography

Xiaohui Zhao

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Biography

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