Data Champions Search

Raquel Manzano

Bioinformatician

Cancer Research UK Cambridge Institute

Areas Of Expertise:

Big data, Sensitive data, Code sharing, Data analysis, Bioinformatics, Coding, Python, R language, Git, Data visualisation, Data mining, Machine learning, Statistical analysis, Electronic Lab Notebooks, Data collection, Version control, Data storage, Institutional repositories, Discipline-specific repositories, Data sharing, Data archiving, Workshop delivery

Contact Information

raquel.manzanogarcia@cruk.cam.ac.uk

My LinkedIn Profile

ORCiD:

0000-0002-5124-8992

Biography

I am bioinformatician who has been working in Cancer Research UK Cambridge Institute since 2017. I have a background in biology and have experience with HPC, version control, R and python, and confidential data. I work with big volumes of cancer patient data on a daily basis.

Additional areas of expertise:

High Performance Computing (HPC) - cluster.

Rina Lai

PhD student

Faculty of Education

Areas Of Expertise:

Data sharing policies, Sensitive data, Code sharing, Data analysis, Open Access publication, R language, Data visualisation, Statistical analysis, Data Management Plans, Data collection, Experimental design, Research data ethics, Data protection and research, Open data, Writing/publishing data papers, Surveys

Contact Information

ORCiD:

Biography

My research lies at the intersection of psychology, education, and computer science. I am interested in the philosophical underpinnings of different statistical paradigms and reproducible science. I was previously trained in Bayesian cognitive modeling at the JAGS and WinBUGS workshop (by Prof. Michael Lee and Prof. Eric-Jan Wagenmakers) and Bayesian item response modeling at the University of Twente (by Prof. Jean-Paul Fox).

Sacha Jones, PhD – Data Champion Programme Supervisor

Research Data Manager

Office of Scholarly Communication

Areas Of Expertise:

Research data management, Data Management Plans, Licensing, Sensitive data, Data storage, Institutional repositories, Apollo (Cambridge University repository), Data sharing, Open data, Statistical analysis, Data collection, Database design, Workshop delivery, Digital illustration

Contact Information

scj23@cam.ac.uk

ORCiD:

0000-0003-0492-2662

Biography

I joined the Office of Scholarly Communication in November 2018 as Research Data Coordinator for the Research Data Management Facility. I manage the Data Champion Programme as part of my role. I have a PhD in Biological Anthropology from the University of Cambridge and was a Post-doctoral Research Associate at the McDonald Institute for Archaeological Research from 2009–2017, specialising in human evolution and Palaeolithic archaeology.

Additional areas of expertise:

Archaeology data

Sergio Martínez Cuesta, PhD

Postdoctoral Research Associate

Cancer Research UK Cambridge Institute

Areas Of Expertise:

Bioinformatics, Cheminformatics, Coding, Python, R language, SQL, Git, Data visualisation, Big data, Data mining, Machine learning, Statistical analysis, Electronic Lab Notebooks, Data collection, Database design, Data architecture, Experimental design, Research data ethics, Data storage, Institutional repositories, Discipline-specific repositories, Data sharing, Data archiving, Code sharing, Open data, Data preservation, Writing/publishing data papers, Imaging, Workshop delivery, Video editing

Contact Information

sermarcue@gmail.com

My LinkedIn Profile

ORCiD:

0000-0001-9806-2805

Biography

My research involves developing computational methods to explore the chemical biology of the genome and investigating proteins catalysing chemical modifications in DNA.

Additional areas of expertise:

Computational biology/chemistry.

Shamith Samarajiwa, PhD

Group Leader

MRC Cancer Unit

Areas Of Expertise:

File sharing systems, Big data, Discipline-specific repositories, Repositories (general), Data sharing policies, Sensitive data, Code sharing, Data analysis, Bioinformatics, Data science, Coding, Python, R language, Git, SQL, C/C++/C# language, Data visualisation, Data mining, Machine learning, Statistical analysis, Data Management Plans, Electronic Lab Notebooks, Data collection, Database design, Experimental design, Data storage, Data sharing, Open data, Version control, Textual data, Workshop delivery, Website development

Contact Information

ss861@mrc-cu.cam.ac.uk

@shamith

ORCiD:

0000-0003-1046-0601

Biography

Shamith is a Group Leader at the MRC Cancer Unit. His lab develops and applies Genomics, Computational Biology, Data Science and AI approaches to understand processes leading to cancer formation and to develop cancer early detection methods.

url: https://samarajiwa-lab.org/

Susana Sauret-Gueto

Research Manager / Research Associate

Department of Plant Sciences

Areas Of Expertise:

Electronic Laboratory Notebooks, Discipline-specific repositories, Repositories (general), FAIR Data, Data analysis, Bioinformatics, Laboratory Information Management Systems (LIMS), R language, Data visualisation, Data collection, Database design, Experimental design, Open data, Imaging

Contact Information

ss2359@cam.ac.uk

@susanasagu

Biography

Biocuration of lab type IIS standardised DNA registries through LIMS-Benchling and R. Assist in the overall management of OpenPlant lab, including Microscopy Hub. Conduct research in Synthetic Biology and Plant Development.

Additional areas of expertise:

Laboratory Information Management Systems (LIMS) – Benchling.

Xinyi Wen

PhD student

Department of History and Philosophy of Science

Areas Of Expertise:

Data Management Plans, Data collection, Database design, Data architecture, Version control, Data storage, Open data, FAIR Data, Data archiving, Data preservation, Writing/publishing data papers, Textual data, Audiovisual data, Digitisation, Workshop delivery, Social media & digital communications, Website development

Contact Information

xw360@cam.ac.uk

@HPSWarburgian

ORCiD:

0000-0002-2147-2854

Biography

I am a historian of science, medicine and humanities. Currently I am a PhD candidate at the Department of History and Philosophy of Science, University of Cambridge, working on the Wellcome-funded research project "The Doctrine of Signatures in Early Modern Medical Practice (221115/Z/20/Z)". I specialise in the history of medicine, natural history and occult sciences in early modern Europe, and the history of ideas in the long nineteenth century, particularly in the circle of art historian Aby Warburg (1866–1929). Before coming to Cambridge, I have worked as a new media art curator in Beijing.

As a historian, I am very interested in the historical aspect of Research Data Management from early modern botanical taxonomy, nineteenth-century index cards to the digital age. I seek to explore how techniques of data management shaped our perspectives, methodologies, and construction of scientific objects in the long run, and how our RDM practice in humanities today could benefit from past theories and experiences. I am the founder of the History of Science Library, a public Zotero library for the history of science and a resource hub for historical and contemporary data management in humanities. Currently I'm running RDM training sessions both in my department and virtually based at the History of Science Library, please feel free to get in touch.

Yasmin Fathy, PhD

Research Associate in Construction Information Technology

Areas Of Expertise:

Python, Git, SQL, Data mining, Machine learning, Data collection, Writing/publishing data papers, Digitisation

Contact Information

ORCiD:

Biography

Yasmin Fathy is a Research Associate at the Department of Engineering, University of Cambridge and a Fellow of the Higher Education Academy. Before joining Cambridge, she was a Software Developer at Genomics Analytics Group at European Bioinformatics Institute (EMBL-EBI), Research Associate in IoT and Machine Learning at Cambridge University, and a KTP Research Associate in Data Science and Machine Learning at UCL. She obtained her PhD from the Institute for Communication Systems (ICS) at the University of Surrey and an MSc in Applied Science and Engineering from the Artificial Intelligence (AI) Lab at Vrije Universiteit Brussel (VUB) in Belgium. Her research interests include IoT, data analytics, digital twin and applied machine learning.

She is an active reviewer and a technical program committee member for multidisciplinary and international journals and conferences, including CCNC, The Web Conference (WWW), IEEE Systems, IEEE IoT Journal, IEEE Transactions on Big Data, and IEEE Access. She is a Topic Editorial in Frontiers in Big Data: Women in Machine Learning and Artificial Intelligence Initiative, a Data Champion at the University of Cambridge and a member of the Cambridge Centre for Data-Driven Discovery (C2D3). She was a BSF (Become a Science Founder) Fellow for entrepreneurship scientists in 2021 and was awarded MEDASTAR Erasmus Mundus and University of Surrey scholarships.

Yasmin is also a volunteer mentor for supporting students with soft & English skills development at Manara and a volunteer instructor at Code First Girls (CFGs).

http://yasminfathy.github.io/

Yiqiao Chen

PhD student

Department of Land Economy

Areas Of Expertise:

Big data, Data analysis, Python, R language, Data mining, Data collection, Research data ethics, Open data, Surveys, Textual data, Geospatial data

Contact Information

yc418@cam.ac.uk

ORCiD:

0000-0003-3575-5553

Biography

Yiqiao is a PhD student in the Department of Land Economy and a member of Churchill College. She holds an MPhil in Planning, Growth and Regeneration from the Department of Land Economy, University of Cambridge. Yiqiao is exploring the integration of Agent-based model with new dataset beyond Census in simulating smart governance in several growing and shrinking UK cities. Her research interests cover urban data analysis (social media data and census data), dynamic modelling and simulating urban systems, urban shrinkage and policy evaluation.

Raquel Manzano

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Biography

Rina Lai

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Biography

Sacha Jones, PhD – Data Champion Programme Supervisor

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Biography

Sergio Martínez Cuesta, PhD

Contact Information

Biography

Shamith Samarajiwa, PhD

Contact Information

Biography

Susana Sauret-Gueto

Contact Information

Biography

Xinyi Wen

Contact Information

Biography

Yasmin Fathy, PhD

Contact Information

Biography

Yiqiao Chen

Contact Information

Biography

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