Data Champions Search

Ali Abbas, PhD

Senior Data Scientist, MRC Epidemiology Unit

Areas Of Expertise:

Python, R language, Git, SQL, C/C++/C# language, Java, Data visualisation, Big data, Data mining, Machine learning, Statistical analysis, Version control, Data sharing, Code sharing, Open data, FAIR Data, Writing/publishing data papers, Geospatial data

Contact Information

aa797@cam.ac.uk

Biography

Ali is Senior Data Scientist and public-health/transport modeller in the Public Health Modelling (PHM) group at the MRC-Epidemiology Unit, University of Cambridge. He is interested in active travel, specifically cycling research.

Coming from a Computer Science background, with a focus on modelling in his PhD, for over a decade, he has been doing data-driven research and development. This includes Exploratory Data Analysis (EDA), Statistical Modelling (or Machine Learning), Interactive Visualization, all with a focus on collaborative, transparent and reproducible research. In addition, he leads in project management and managing, training, guiding, and teaching of junior staff in his Unit. His work can be seen on GitHub at https://github.com/usr110.

Arian Jamasb

PhD student

Department of Biochemistry

Department of Computer Science and Technology

Areas Of Expertise:

Python, R language, Git, Data visualisation, Big data, Machine learning, Statistical analysis, Version control, Discipline-specific repositories, Data sharing, Code sharing, Open data, Cheminformatics, Bioinformatics

Contact Information

ORCiD:

Biography

My research focuses on the applications of machine learning to problems in structural biology and drug discovery.

Darran Clements

Imaging Assistant

Wellcome–MRC Cambridge Stem Cell Institute

Areas Of Expertise:

Python, Data visualisation, Machine learning, Version control, Copyright, Discipline-specific repositories, Data sharing, Data archiving, Data preservation, Surveys, Imaging, Social media & digital communications, Website development

Contact Information

dkc25@cam.ac.uk

@darranclem

My LinkedIn Profile

Dominik Krzeminski, PhD

Research Associate

Contact Information

dkk33@cam.ac.uk

@dokatox

ORCiD:

0000-0003-4568-0583

Biography

Dominik graduated from Applied Physics at the University of Warsaw, before transitioning to neuroscience. In 2021, he completed PhD at Cardiff University Brain Research Imaging Centre. Also, the same year, he became a Software Sustainability Institute Fellow concentrated on promoting good scientific programming practices. He organizes workshops focused on testing and code reviews. Currently, Dominik works as a Research Associate in the FlyConnectome group, where he develops computational tools that support structural analysis of a fruit fly (Drosophila) nervous system.

Elizabeth Smith

Associate Editor for Digital Development, Cambridge University Library

Areas Of Expertise:

Git, Version control, Institutional repositories, Discipline-specific repositories, Data sharing, Data archiving, Textual data

Contact Information

els47@cam.ac.uk

@ElizabethLSmit1

ORCiD:

0000-0002-2711-2390

Biography

Elizabeth has an MPhil in HPS from Cambridge and has worked for the Newton Project Canada. She has worked for the Darwin Correspondence Project for more than fifteen years, and assisted in the conversion of the Project's core files to TEI XML, and is now developing and implementing strategies to ensure the quality, robustness, interoperability, and long-term viability of our electronic data. She is a co-founder of Epsilon, a nineteenth century science letters platform and has been a guest lecturer at the Digital Humanities at Oxford Summer School.

Raquel Manzano

Bioinformatician

Cancer Research UK Cambridge Institute

Areas Of Expertise:

Big data, Sensitive data, Code sharing, Data analysis, Bioinformatics, Coding, Python, R language, Git, Data visualisation, Data mining, Machine learning, Statistical analysis, Electronic Lab Notebooks, Data collection, Version control, Data storage, Institutional repositories, Discipline-specific repositories, Data sharing, Data archiving, Workshop delivery

Contact Information

raquel.manzanogarcia@cruk.cam.ac.uk

My LinkedIn Profile

ORCiD:

0000-0002-5124-8992

Biography

I am bioinformatician who has been working in Cancer Research UK Cambridge Institute since 2017. I have a background in biology and have experience with HPC, version control, R and python, and confidential data. I work with big volumes of cancer patient data on a daily basis.

Additional areas of expertise:

High Performance Computing (HPC) - cluster.

Sergio Martínez Cuesta, PhD

Postdoctoral Research Associate

Cancer Research UK Cambridge Institute

Areas Of Expertise:

Bioinformatics, Cheminformatics, Coding, Python, R language, SQL, Git, Data visualisation, Big data, Data mining, Machine learning, Statistical analysis, Electronic Lab Notebooks, Data collection, Database design, Data architecture, Experimental design, Research data ethics, Data storage, Institutional repositories, Discipline-specific repositories, Data sharing, Data archiving, Code sharing, Open data, Data preservation, Writing/publishing data papers, Imaging, Workshop delivery, Video editing

Contact Information

sermarcue@gmail.com

My LinkedIn Profile

ORCiD:

0000-0001-9806-2805

Biography

My research involves developing computational methods to explore the chemical biology of the genome and investigating proteins catalysing chemical modifications in DNA.

Additional areas of expertise:

Computational biology/chemistry.

Shamith Samarajiwa, PhD

Group Leader

MRC Cancer Unit

Areas Of Expertise:

File sharing systems, Big data, Discipline-specific repositories, Repositories (general), Data sharing policies, Sensitive data, Code sharing, Data analysis, Bioinformatics, Data science, Coding, Python, R language, Git, SQL, C/C++/C# language, Data visualisation, Data mining, Machine learning, Statistical analysis, Data Management Plans, Electronic Lab Notebooks, Data collection, Database design, Experimental design, Data storage, Data sharing, Open data, Version control, Textual data, Workshop delivery, Website development

Contact Information

ss861@mrc-cu.cam.ac.uk

@shamith

ORCiD:

0000-0003-1046-0601

Biography

Shamith is a Group Leader at the MRC Cancer Unit. His lab develops and applies Genomics, Computational Biology, Data Science and AI approaches to understand processes leading to cancer formation and to develop cancer early detection methods.

url: https://samarajiwa-lab.org/

Sherine Awad Mahmoud, PhD

Postdoctoral Research Associate, Clinical Biochemistry

Areas Of Expertise:

Python, R language, Git, C/C++ language, Data mining, Machine learning, Version control, Licensing, Copyright, Research data ethics, Data policies, Data storage, General repositories, Data sharing, Code sharing, FAIR Data, Writing/publishing data papers, Bioinformatics

Contact Information

sa941@medschl.cam.ac.uk

Biography

I have a PhD in Computer Science specialised in Bioinformatics from Michigan State university. I had my postdoc training in Bioinformatics from University of California Davis before moving to University of Cambridge.

Tania L. Maxwell, PhD

Research Associate

Areas Of Expertise:

R language, Git, Data visualisation, Statistical analysis, Data collection, Data architecture, Version control, General repositories, Data sharing, Code sharing, Open data, FAIR Data, Data archiving, Workshop delivery, Website development

Contact Information

ORCiD:

Biography

I am a Postdoctoral Research Associate in the Conservation Science Group at the University of Cambridge, working on a global and updateable model and map of soil carbon in tidal marshes. To do so, I am compiling a global training dataset and will develop the model using R and Google Earth Engine. Previously, I worked on nutrient cycling in forests during my PhD at the French National Research Institute for Agriculture, Food and Environment (INRAE) in Bordeaux, and at Laval University in Quebec, Canada. My professional interests include ecology [forest, soil, coastal], biogeochemistry, global changes, R, data analysis and reproducible coding.

Ali Abbas, PhD

Contact Information

Biography

Arian Jamasb

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Biography

Darran Clements

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Dominik Krzeminski, PhD

Contact Information

Biography

Elizabeth Smith

Contact Information

Biography

Raquel Manzano

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Biography

Sergio Martínez Cuesta, PhD

Contact Information

Biography

Shamith Samarajiwa, PhD

Contact Information

Biography

Sherine Awad Mahmoud, PhD

Contact Information

Biography

Tania L. Maxwell, PhD

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Biography

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