Data Champions Search

Amy Foreman, PhD

Research Project Manager/Information Scientist

The Gurdon Institute

Areas Of Expertise:

R language, SQL, Data visualisation, Data collection, Database design, Open data, Writing/publishing data papers, Workshop delivery

Contact Information

alf45@cam.ac.uk

@AmzForeman

My LinkedIn Profile

Biography

Amy is a Research Project Manager and Information Scientist at the Gurdon Institute. She has experience working for an Open Access publisher and completed her PhD at the University of Exeter in 2019.

Andrew Thwaites, PhD

Visiting Scientist

Department of Psychology

Areas Of Expertise:

Bioinformatics, Data sharing, Big data, Coding, Python, R language, SQL, Git, Matlab, Java, Data visualisation, Machine learning, Statistical analysis, Data Management Plans, Data policies, Data archiving, Code sharing, Open data, Imaging, Illustration, Website development

Contact Information

acgt2@cam.ac.uk

ORCiD:

0000-0002-6237-7140

Biography

Additional areas of expertise:

Neuroscience data

Dominik Krzeminski, PhD

Research Associate

Contact Information

dkk33@cam.ac.uk

@dokatox

ORCiD:

0000-0003-4568-0583

Biography

Dominik graduated from Applied Physics at the University of Warsaw, before transitioning to neuroscience. In 2021, he completed PhD at Cardiff University Brain Research Imaging Centre. Also, the same year, he became a Software Sustainability Institute Fellow concentrated on promoting good scientific programming practices. He organizes workshops focused on testing and code reviews. Currently, Dominik works as a Research Associate in the FlyConnectome group, where he develops computational tools that support structural analysis of a fruit fly (Drosophila) nervous system.

Hugo P. Bastos, PhD

Postdoctoral Research Associate, Haematology/Cambridge Stem Cell Institute

Areas Of Expertise:

Python, R language, SQL, Data visualisation, Machine learning, Statistical analysis, Database design, Data storage, Bioinformatics

Contact Information

hpb29@cam.ac.uk

ORCiD:

0000-0002-8072-4070

Biography

I provide Bioinformatic support for a few research groups in the Cambridge Stem Cell Institute. For the most part I deal with the analysis of single cell sequencing data, storage management of such data and the deployment of data processing pipelines into HPC environments.

Qi Wang, PhD

Bioinformatician

Department of Plant Sciences

Areas Of Expertise:

Big data, Data analysis, Bioinformatics, Coding, Python, R language, SQL, Git, Data visualisation, Data mining, Machine learning, Statistical analysis, Experimental design, Data storage, Discipline-specific repositories, Data sharing, Code sharing, Writing/publishing data papers, Workshop delivery

Contact Information

qw254@cam.ac.uk

ORCiD:

0000-0002-6420-1720

Biography

Qi received her PhD at the University of California, Los Angeles, where she developed computational methods to study alternative splicing and the evolution of HIV. Later she joined the UCLA Division of Dermatology to help identify the resistance mechanisms of targeted cancer therapies using computational tools.

In 2011 she was awarded the Humboldt Research Fellowship to work in the Division of Theoretical Bioinformatics, and later the Division of Applied Bioinformatics, at the German Cancer Research Centre. There she worked on diverse bioinformatics projects with NGS data, such as studying genome-wide epigenetic regulation of cell differentiation, developing sequencing protocols and detecting somatic mutations from whole-genome sequencing data, as well as data integration and predictive modelling.

Currently, she provides bioinformatics training and support to PhD students and postdoctoral researchers in the lab of Professor Beverley Glover.

Amy Foreman, PhD

Contact Information

Biography

Andrew Thwaites, PhD

Contact Information

Biography

Dominik Krzeminski, PhD

Contact Information

Biography

Hugo P. Bastos, PhD

Contact Information

Biography

Qi Wang, PhD

Contact Information

Biography

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